Reading GO enrichment object
en_head = readRDS(here::here('data/enGo_head.Rds'))
Level 3 blocks
goplot_list = llply(en_head$summary$Name[en_head$summary$Nested_Level==3],
XGR_plot, en_head$XGR, en_head$summary)
## [1] "0-0"
## [1] "1-1"
## [1] "2-1"
## [1] "3-0"
## [1] "4-0"
names(goplot_list) = en_head$summary$Name[en_head$summary$Nested_Level==3]
0-0 - Neuro and sensing

1-1 - Translation, protein transport, immune response

3-0 - Development, transcription, splicing, cell respiration

4-0 - Muscle delevelopment, krebs cycle

Probing some interesting blocks
Neuro
0-0-0
## [1] "0-0-0"

Overall: Gorilla 0-0-0
- 24 - Biological regulation, signal transduction, cell component assembly, neuro development Gorilla
- 17 - Regulation of cellular process Gorilla
- 7 - phototransduction, detection of light stimulus, G protein-coupled receptor signaling pathway Gorilla
- 3 - RNA processing Gorilla
- 0 - neuropeptide signaling pathway, synaptic vesicle [transport|localization|exocytosis], synapse Gorilla
Translation
1-1-1
## [1] "1-1-1"

Overall: Gorilla 1-1-1
- 1 - macromolecule biosynthetic process, translation Gorilla
- 9 - cytoplasmic translation Gorilla
- 33 - cytoplasmic translation, rRNA processing Gorilla
- 35 - translation, [peptide|peptide] biosynthetic process, ribosomal large subunit assembly Gorilla
6-1-1
## [1] "6-1-1"

Overall: Gorilla 6-1-1
- 8 - translational initiation Gorilla
- 14 - translation, [peptide|peptide biosynthetic process] biosynthetic process, ribonucleoprotein complex subunit organization Gorilla
- 44 - cytoplasmic translation Gorilla
- 49 - nucleobase-containing small molecule biosynthetic process (super weak) Gorilla
Immune response
10-1-1
## [1] "10-1-1"

Overall: Gorilla 10-1-1
- 15 - establishment of protein localization, protein transport Gorilla
- 22 - protein targeting to membrane, translocation Gorilla
- 52 - response to other organism, response to external biotic stimulus, defense response Gorilla
Cell respiration
11-3-0
## [1] "11-3-0"

Overall: Gorilla 11-3-0
- 20 - electron transport chain, generation of precursor metabolites and energy, oxidation-reduction process, mitochondrial respiratory chain complex assembly Gorilla
- 21 - multicellular organism reproduction (weak) Gorilla
- 26 - purine ribonucleotide biosynthetic process, ATP biosynthetic process, ATP metabolic process, acyl-CoA biosynthetic process Gorilla
Development
7-3-0
## [1] "7-3-0"

Overall: Gorilla 7-3-0
- 11 - apposition of dorsal and ventral imaginal disc-derived wing surfaces, sarcomere organization, proton transmembrane transport Gorilla
- 27 - anatomical structure morphogenesis, developmental process Gorilla
- 51 - Nothing Gorilla
Block summary table:
dplyr::select(en_head$summary, Nested_Level, Name, N_genes, Internal_degree, Assortatitvity, p.adjust, n_enrich)